Table 1 Comparison of nucleotide and amino acid homology between the discovered viruses and closely related viruses
Nucleotide/Amino acid identity | ||||||
|---|---|---|---|---|---|---|
Virus name | Genome | ORF1ab | S | E | M | N |
SG_DWY40a | ||||||
MW436465 Anser fabalis-NCN2 | 93.6 | 97.3/98.5 | 72.2/69.8 | 97.7/99.0 | 94.3/97.4 | 97.1/97.8 |
NC046965 Canada Goose-CB17 | 87.9 | 86.4/89.6 | 90.1/92.6 | 97.0/99.0 | 95.0/97.8 | 94.1/94.5 |
MW588092 Mute swan feces | 86.1 | 89.9/93.0 | 51.0/35.5 | 98.3/98.0 | 95.2/96.9 | 94.0/94.9 |
CP_XN11a | ||||||
NC016994 Night heron HKU19 | 97.1 | 97.5/98.7 | 95.2/97.2 | 98.4/98.8 | 96.3/97.7 | 95.9/98.0 |
MD_XN18a | ||||||
OQ749506 Gammacoronavirus sp. DLSL21 | 97.4 | 97.4/98.2 | 99.0/98.9 | 98.9/96.7 | 95.0/96.9 | 95.0/97.1 |
KP118889 Avian IBV ck/CH/LHB/130575 | 96.0 | 97.0/98.2 | 90.8/92.8 | 99.3/96.7 | 95.4/96.9 | 95.4/96.8 |
KP118890 Avian IBV ck/CH/LHB/130578 | 96.0 | 97.0/98.2 | 90.7/92.7 | 99.3/96.7 | 95.4/96.9 | 95.4/96.8 |
MG197727 Avian IBV CK/CH/GD/QY16 | 95.6 | 97.1/98.0 | 90.5/92.4 | 98.2/94.6 | 95.3/96.5 | 87.2/92.2 |
JF705860 Duck CoV DK/CH/HN/ZZ2004 | 87.9 | 88.8/92.4 | 81.9/83.3 | 85.1/85.9 | 88.6/91.2 | 86.7/92.4 |