Treatment | Sample source | Sampling location | Symbol | Sample size | ASV | Reads |
---|---|---|---|---|---|---|
Predisinfection (N) | Farrowing houses | Environmental samples, pork barn aisles | Dc | 6 | 1,556 | 305,004 |
Environmental samples, pork pen floors | Dg | 6 | 870 | 311,017 | ||
Skin samples, piglet skins | Ds | 6 | 955 | 300,479 | ||
Sow barns | Environmental samples, pork barn aisles | Nc | 6 | 2,767 | 302,291 | |
Environmental samples, pork pen floors | Ng | 6 | 2,229 | 305,212 | ||
Skin samples, sow skins | Ns | 6 | 1,251 | 302,265 | ||
Living areas | Environmental samples, living area floors | L | 6 | 1,911 | 320,410 | |
Postdisinfection (D) | Farrowing houses | Environmental samples, pork barn aisles | aDc | 6 | 1,693 | 298,247 |
Environmental samples, pork pen floors | aDg | 6 | 823 | 284,986 | ||
Skin samples, piglet skins | aDs | 6 | 997 | 293,240 | ||
Sow barns | Environmental samples, pork barn aisles | aNc | 6 | 2,478 | 326,207 | |
Environmental samples, pork pen floors | aNg | 6 | 2,321 | 305,888 | ||
Skin samples, sow skins | aNs | 6 | 2,702 | 308,859 | ||
Living areas | Environmental samples, living area floors | aL | 6 | 1,429 | 323,548 |